Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.35■□□□□ 0.37
Hcn3O88705 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hcn3O88705 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Hcn3O88705 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn3O88705 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn3O88705 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn3O88705 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn3O88705 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn3O88705 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn3O88705 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn3O88705 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn3O88705 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hcn3O88705 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.33■□□□□ 0.37
Hcn3O88705 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn3O88705 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn3O88705 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn3O88705 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.33■□□□□ 0.37
Hcn3O88705 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hcn3O88705 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn3O88705 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn3O88705 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hcn3O88705 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn3O88705 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn3O88705 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.33■□□□□ 0.37
Hcn3O88705 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn3O88705 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.33■□□□□ 0.37
Hcn3O88705 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn3O88705 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hcn3O88705 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.33■□□□□ 0.36
Hcn3O88705 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Hcn3O88705 Smad6-203ENSMUST00000179458 273 ntBASIC17.33■□□□□ 0.36
Hcn3O88705 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.33■□□□□ 0.36
Hcn3O88705 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.33■□□□□ 0.36
Hcn3O88705 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcn3O88705 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn3O88705 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.32■□□□□ 0.36
Hcn3O88705 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn3O88705 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn3O88705 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn3O88705 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.32■□□□□ 0.36
Hcn3O88705 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Hcn3O88705 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn3O88705 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcn3O88705 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Hcn3O88705 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hcn3O88705 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Hcn3O88705 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Hcn3O88705 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Hcn3O88705 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hcn3O88705 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hcn3O88705 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hcn3O88705 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.31■□□□□ 0.36
Hcn3O88705 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.3■□□□□ 0.36
Hcn3O88705 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.3■□□□□ 0.36
Hcn3O88705 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.3■□□□□ 0.36
Hcn3O88705 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hcn3O88705 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hcn3O88705 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn3O88705 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn3O88705 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.29■□□□□ 0.36
Hcn3O88705 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn3O88705 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn3O88705 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms