Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gm38205-201ENSMUST00000192243 258 ntBASIC16.93■□□□□ 0.3
Tulp3O88413 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tulp3O88413 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tulp3O88413 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tulp3O88413 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tulp3O88413 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Tulp3O88413 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tulp3O88413 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tulp3O88413 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tulp3O88413 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tulp3O88413 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
Tulp3O88413 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tulp3O88413 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.92■□□□□ 0.3
Tulp3O88413 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.92■□□□□ 0.3
Tulp3O88413 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.92■□□□□ 0.3
Tulp3O88413 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tulp3O88413 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tulp3O88413 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Tulp3O88413 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.91■□□□□ 0.3
Tulp3O88413 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.91■□□□□ 0.3
Tulp3O88413 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tulp3O88413 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tulp3O88413 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Tulp3O88413 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.91■□□□□ 0.3
Tulp3O88413 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Tulp3O88413 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Tulp3O88413 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Gm8969-201ENSMUST00000199694 526 ntBASIC16.9■□□□□ 0.3
Tulp3O88413 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.9■□□□□ 0.3
Tulp3O88413 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Tulp3O88413 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.9■□□□□ 0.3
Tulp3O88413 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.9■□□□□ 0.3
Tulp3O88413 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.9■□□□□ 0.3
Tulp3O88413 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tulp3O88413 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.9■□□□□ 0.3
Tulp3O88413 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tulp3O88413 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Tulp3O88413 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.89■□□□□ 0.29
Tulp3O88413 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Tulp3O88413 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.89■□□□□ 0.29
Tulp3O88413 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.89■□□□□ 0.29
Tulp3O88413 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Tgds-204ENSMUST00000228543 1594 ntBASIC16.89■□□□□ 0.29
Tulp3O88413 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tulp3O88413 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tulp3O88413 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tulp3O88413 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tulp3O88413 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tulp3O88413 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.88■□□□□ 0.29
Tulp3O88413 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tulp3O88413 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tulp3O88413 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tulp3O88413 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tulp3O88413 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms