Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tgfbr3O88393 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tgfbr3O88393 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr3O88393 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Tgfbr3O88393 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.26■□□□□ 0.35
Tgfbr3O88393 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr3O88393 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr3O88393 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr3O88393 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr3O88393 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr3O88393 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr3O88393 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.26■□□□□ 0.35
Tgfbr3O88393 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr3O88393 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tgfbr3O88393 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Tgfbr3O88393 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tgfbr3O88393 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.24■□□□□ 0.35
Tgfbr3O88393 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tgfbr3O88393 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.23■□□□□ 0.35
Tgfbr3O88393 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Gm6659-201ENSMUST00000174752 547 ntBASIC17.23■□□□□ 0.35
Tgfbr3O88393 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tgfbr3O88393 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tgfbr3O88393 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.22■□□□□ 0.35
Tgfbr3O88393 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Gm21362-201ENSMUST00000194272 928 ntBASIC17.22■□□□□ 0.35
Tgfbr3O88393 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tgfbr3O88393 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Gm10819-201ENSMUST00000099988 561 ntBASIC17.21■□□□□ 0.35
Tgfbr3O88393 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tgfbr3O88393 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tgfbr3O88393 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms