Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Rdh5O55240 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rdh5O55240 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rdh5O55240 Gm7290-201ENSMUST00000104990 617 ntBASIC17.16■□□□□ 0.34
Rdh5O55240 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Gm12918-201ENSMUST00000120234 636 ntBASIC17.16■□□□□ 0.34
Rdh5O55240 Gm15710-201ENSMUST00000121821 636 ntBASIC17.16■□□□□ 0.34
Rdh5O55240 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rdh5O55240 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Gm5075-201ENSMUST00000196916 622 ntBASIC17.16■□□□□ 0.34
Rdh5O55240 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.16■□□□□ 0.34
Rdh5O55240 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.16■□□□□ 0.34
Rdh5O55240 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rdh5O55240 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Rdh5O55240 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh5O55240 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh5O55240 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rdh5O55240 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh5O55240 Fst-202ENSMUST00000223640 2612 ntBASIC17.15■□□□□ 0.34
Rdh5O55240 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rdh5O55240 Gm6211-202ENSMUST00000167849 925 ntBASIC17.15■□□□□ 0.34
Rdh5O55240 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.15■□□□□ 0.34
Rdh5O55240 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh5O55240 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Rdh5O55240 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh5O55240 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.15■□□□□ 0.34
Rdh5O55240 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh5O55240 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh5O55240 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rdh5O55240 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rdh5O55240 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.15■□□□□ 0.34
Rdh5O55240 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.34
Rdh5O55240 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rdh5O55240 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rdh5O55240 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rdh5O55240 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.14■□□□□ 0.33
Rdh5O55240 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.14■□□□□ 0.33
Rdh5O55240 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Rdh5O55240 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rdh5O55240 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.13■□□□□ 0.33
Rdh5O55240 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rdh5O55240 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.13■□□□□ 0.33
Rdh5O55240 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.13■□□□□ 0.33
Rdh5O55240 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rdh5O55240 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Gm27011-201ENSMUST00000182352 972 ntBASIC17.13■□□□□ 0.33
Rdh5O55240 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.13■□□□□ 0.33
Rdh5O55240 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rdh5O55240 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Rdh5O55240 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rdh5O55240 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rdh5O55240 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh5O55240 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh5O55240 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh5O55240 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh5O55240 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh5O55240 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh5O55240 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh5O55240 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh5O55240 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.12■□□□□ 0.33
Rdh5O55240 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rdh5O55240 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rdh5O55240 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rdh5O55240 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms