Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SncaO55042 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.03■□□□□ -0
SncaO55042 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Gm38205-201ENSMUST00000192243 258 ntBASIC15.03■□□□□ -0
SncaO55042 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.03■□□□□ -0
SncaO55042 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.03■□□□□ -0
SncaO55042 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.03■□□□□ -0
SncaO55042 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SncaO55042 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.03■□□□□ -0
SncaO55042 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SncaO55042 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.03■□□□□ -0
SncaO55042 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.02■□□□□ -0
SncaO55042 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.02■□□□□ -0
SncaO55042 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SncaO55042 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.02■□□□□ -0
SncaO55042 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.02■□□□□ -0
SncaO55042 Gm43060-201ENSMUST00000200621 289 ntBASIC15.02■□□□□ -0
SncaO55042 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SncaO55042 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SncaO55042 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SncaO55042 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SncaO55042 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SncaO55042 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SncaO55042 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.01□□□□□ -0.01
SncaO55042 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SncaO55042 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.01□□□□□ -0.01
SncaO55042 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.01□□□□□ -0.01
SncaO55042 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SncaO55042 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.01□□□□□ -0.01
SncaO55042 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SncaO55042 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SncaO55042 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SncaO55042 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SncaO55042 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15□□□□□ -0.01
SncaO55042 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15□□□□□ -0.01
SncaO55042 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SncaO55042 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SncaO55042 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SncaO55042 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SncaO55042 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SncaO55042 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
SncaO55042 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.99□□□□□ -0.01
SncaO55042 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.99□□□□□ -0.01
SncaO55042 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SncaO55042 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SncaO55042 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms