Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Phox2bO35690 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Phox2bO35690 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Phox2bO35690 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Phox2bO35690 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.13■□□□□ 0.49
Phox2bO35690 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Phox2bO35690 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Phox2bO35690 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Phox2bO35690 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Phox2bO35690 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.12■□□□□ 0.49
Phox2bO35690 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.12■□□□□ 0.49
Phox2bO35690 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Phox2bO35690 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Phox2bO35690 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Phox2bO35690 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Phox2bO35690 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Phox2bO35690 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.11■□□□□ 0.49
Phox2bO35690 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Timm23-208ENSMUST00000226683 750 ntBASIC18.11■□□□□ 0.49
Phox2bO35690 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Phox2bO35690 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.11■□□□□ 0.49
Phox2bO35690 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Phox2bO35690 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Phox2bO35690 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Phox2bO35690 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.1■□□□□ 0.49
Phox2bO35690 Gm6443-201ENSMUST00000203599 874 ntBASIC18.1■□□□□ 0.49
Phox2bO35690 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.1■□□□□ 0.49
Phox2bO35690 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Phox2bO35690 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.09■□□□□ 0.49
Phox2bO35690 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Phox2bO35690 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Phox2bO35690 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.09■□□□□ 0.49
Phox2bO35690 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.09■□□□□ 0.49
Phox2bO35690 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Phox2bO35690 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.09■□□□□ 0.49
Phox2bO35690 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.09■□□□□ 0.49
Phox2bO35690 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Phox2bO35690 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Phox2bO35690 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Phox2bO35690 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Phox2bO35690 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Phox2bO35690 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Phox2bO35690 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Phox2bO35690 Gm11434-201ENSMUST00000122379 629 ntBASIC18.08■□□□□ 0.48
Phox2bO35690 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.08■□□□□ 0.48
Phox2bO35690 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Phox2bO35690 Mzt1-203ENSMUST00000227948 952 ntBASIC18.08■□□□□ 0.48
Phox2bO35690 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Phox2bO35690 Mtag2-201ENSMUST00000058665 714 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms