Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Gm12441-201ENSMUST00000121806 588 ntBASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11aO35305 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Gm2399-201ENSMUST00000104944 225 ntBASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Tnfrsf11aO35305 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11aO35305 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Gm12527-201ENSMUST00000117967 564 ntBASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11aO35305 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11aO35305 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11aO35305 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnfrsf11aO35305 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
Tnfrsf11aO35305 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 Gm20049-201ENSMUST00000219950 730 ntBASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11aO35305 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms