Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf3O08791 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Flg-201ENSMUST00000050758 1488 ntBASIC18.78■□□□□ 0.6
Ebf3O08791 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ebf3O08791 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.78■□□□□ 0.6
Ebf3O08791 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.78■□□□□ 0.6
Ebf3O08791 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ebf3O08791 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ebf3O08791 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ebf3O08791 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf3O08791 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.77■□□□□ 0.6
Ebf3O08791 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf3O08791 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf3O08791 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf3O08791 Gm11927-201ENSMUST00000118472 759 ntBASIC18.77■□□□□ 0.6
Ebf3O08791 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf3O08791 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ebf3O08791 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.77■□□□□ 0.6
Ebf3O08791 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.77■□□□□ 0.6
Ebf3O08791 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.77■□□□□ 0.6
Ebf3O08791 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf3O08791 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf3O08791 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ebf3O08791 Grk6-206ENSMUST00000224995 2971 ntBASIC18.77■□□□□ 0.59
Ebf3O08791 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ebf3O08791 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.76■□□□□ 0.59
Ebf3O08791 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ebf3O08791 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.76■□□□□ 0.59
Ebf3O08791 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ebf3O08791 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.76■□□□□ 0.59
Ebf3O08791 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ebf3O08791 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ebf3O08791 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ebf3O08791 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.75■□□□□ 0.59
Ebf3O08791 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ebf3O08791 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ebf3O08791 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.75■□□□□ 0.59
Ebf3O08791 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.75■□□□□ 0.59
Ebf3O08791 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ebf3O08791 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.75■□□□□ 0.59
Ebf3O08791 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
Ebf3O08791 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ebf3O08791 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.74■□□□□ 0.59
Ebf3O08791 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.74■□□□□ 0.59
Ebf3O08791 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ebf3O08791 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.74■□□□□ 0.59
Ebf3O08791 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ebf3O08791 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ebf3O08791 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Ebf3O08791 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ebf3O08791 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms