Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Gm3415J3QMS8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.33■□□□□ 0.68
Gm3415J3QMS8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm3415J3QMS8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Rab3c-203ENSMUST00000224180 967 ntBASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm3415J3QMS8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3415J3QMS8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm3415J3QMS8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3415J3QMS8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3415J3QMS8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm3415J3QMS8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
Gm3415J3QMS8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Gm3415J3QMS8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm3415J3QMS8 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.31■□□□□ 0.68
Gm3415J3QMS8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.31■□□□□ 0.68
Gm3415J3QMS8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm3415J3QMS8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm3415J3QMS8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.29■□□□□ 0.68
Gm3415J3QMS8 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Gm4968-201ENSMUST00000071458 858 ntBASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm3415J3QMS8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm3415J3QMS8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3415J3QMS8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm3415J3QMS8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm3415J3QMS8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm3415J3QMS8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3415J3QMS8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms