Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NpcdF8VQB8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NpcdF8VQB8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NpcdF8VQB8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Gm38285-201ENSMUST00000192928 922 ntBASIC21.8■■□□□ 1.08
NpcdF8VQB8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NpcdF8VQB8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Gm7284-201ENSMUST00000131667 944 ntBASIC21.79■■□□□ 1.08
NpcdF8VQB8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NpcdF8VQB8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NpcdF8VQB8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Gm2274-201ENSMUST00000184539 609 ntBASIC21.78■■□□□ 1.08
NpcdF8VQB8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NpcdF8VQB8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.77■■□□□ 1.08
NpcdF8VQB8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NpcdF8VQB8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NpcdF8VQB8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NpcdF8VQB8 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.77■■□□□ 1.08
NpcdF8VQB8 Gm7461-201ENSMUST00000058918 827 ntBASIC21.77■■□□□ 1.08
NpcdF8VQB8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NpcdF8VQB8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NpcdF8VQB8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NpcdF8VQB8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NpcdF8VQB8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NpcdF8VQB8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NpcdF8VQB8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
NpcdF8VQB8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
NpcdF8VQB8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NpcdF8VQB8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NpcdF8VQB8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NpcdF8VQB8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NpcdF8VQB8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NpcdF8VQB8 Gm22697-201ENSMUST00000175194 63 ntBASIC21.76■■□□□ 1.07
NpcdF8VQB8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NpcdF8VQB8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NpcdF8VQB8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NpcdF8VQB8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NpcdF8VQB8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NpcdF8VQB8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NpcdF8VQB8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
NpcdF8VQB8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.75■■□□□ 1.07
NpcdF8VQB8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NpcdF8VQB8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NpcdF8VQB8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NpcdF8VQB8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NpcdF8VQB8 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.75■■□□□ 1.07
NpcdF8VQB8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NpcdF8VQB8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NpcdF8VQB8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NpcdF8VQB8 Gm44771-201ENSMUST00000206975 626 ntBASIC21.74■■□□□ 1.07
NpcdF8VQB8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
NpcdF8VQB8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NpcdF8VQB8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NpcdF8VQB8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NpcdF8VQB8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NpcdF8VQB8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NpcdF8VQB8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NpcdF8VQB8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NpcdF8VQB8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NpcdF8VQB8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NpcdF8VQB8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms