Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Colca2F8VPY8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Colca2F8VPY8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.3■□□□□ 0.36
Colca2F8VPY8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.3■□□□□ 0.36
Colca2F8VPY8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Colca2F8VPY8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Colca2F8VPY8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Colca2F8VPY8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Colca2F8VPY8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Colca2F8VPY8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Colca2F8VPY8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Colca2F8VPY8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Gm27704-201ENSMUST00000185094 107 ntBASIC17.29■□□□□ 0.36
Colca2F8VPY8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Colca2F8VPY8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Gm5587-201ENSMUST00000206270 674 ntBASIC17.28■□□□□ 0.36
Colca2F8VPY8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Colca2F8VPY8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Colca2F8VPY8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Colca2F8VPY8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.27■□□□□ 0.36
Colca2F8VPY8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.27■□□□□ 0.36
Colca2F8VPY8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Colca2F8VPY8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.27■□□□□ 0.35
Colca2F8VPY8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Colca2F8VPY8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Colca2F8VPY8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Colca2F8VPY8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Colca2F8VPY8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Gm21559-201ENSMUST00000220638 855 ntBASIC17.26■□□□□ 0.35
Colca2F8VPY8 Gm8587-201ENSMUST00000076538 843 ntBASIC17.26■□□□□ 0.35
Colca2F8VPY8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Colca2F8VPY8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Gm9013-201ENSMUST00000132939 882 ntBASIC17.25■□□□□ 0.35
Colca2F8VPY8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Colca2F8VPY8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Colca2F8VPY8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms