Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ube4aE9Q735 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ube4aE9Q735 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ube4aE9Q735 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ube4aE9Q735 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Ube4aE9Q735 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.88■■□□□ 1.09
Ube4aE9Q735 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4aE9Q735 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Ube4aE9Q735 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.87■■□□□ 1.09
Ube4aE9Q735 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Gm10231-201ENSMUST00000181584 441 ntBASIC21.87■■□□□ 1.09
Ube4aE9Q735 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Gm10175-202ENSMUST00000208752 441 ntBASIC21.87■■□□□ 1.09
Ube4aE9Q735 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.87■■□□□ 1.09
Ube4aE9Q735 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.87■■□□□ 1.09
Ube4aE9Q735 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
Ube4aE9Q735 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ube4aE9Q735 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ube4aE9Q735 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ube4aE9Q735 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ube4aE9Q735 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.86■■□□□ 1.09
Ube4aE9Q735 Gm13559-201ENSMUST00000120476 863 ntBASIC21.86■■□□□ 1.09
Ube4aE9Q735 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.86■■□□□ 1.09
Ube4aE9Q735 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ube4aE9Q735 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ube4aE9Q735 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Ube4aE9Q735 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4aE9Q735 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4aE9Q735 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.85■■□□□ 1.09
Ube4aE9Q735 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.85■■□□□ 1.09
Ube4aE9Q735 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Ube4aE9Q735 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4aE9Q735 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4aE9Q735 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4aE9Q735 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4aE9Q735 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4aE9Q735 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4aE9Q735 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4aE9Q735 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4aE9Q735 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.84■■□□□ 1.09
Ube4aE9Q735 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.84■■□□□ 1.09
Ube4aE9Q735 Gm11539-201ENSMUST00000119837 557 ntBASIC21.84■■□□□ 1.09
Ube4aE9Q735 Gm13436-201ENSMUST00000120418 567 ntBASIC21.84■■□□□ 1.09
Ube4aE9Q735 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4aE9Q735 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.84■■□□□ 1.09
Ube4aE9Q735 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Ube4aE9Q735 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4aE9Q735 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Ube4aE9Q735 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ube4aE9Q735 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ube4aE9Q735 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ube4aE9Q735 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Ube4aE9Q735 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ube4aE9Q735 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Ube4aE9Q735 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ube4aE9Q735 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.82■■□□□ 1.08
Ube4aE9Q735 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4aE9Q735 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4aE9Q735 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4aE9Q735 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4aE9Q735 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4aE9Q735 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ube4aE9Q735 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4aE9Q735 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4aE9Q735 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4aE9Q735 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4aE9Q735 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.81■■□□□ 1.08
Ube4aE9Q735 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4aE9Q735 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4aE9Q735 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4aE9Q735 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.81■■□□□ 1.08
Ube4aE9Q735 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4aE9Q735 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4aE9Q735 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.8■■□□□ 1.08
Ube4aE9Q735 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms