Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Gm8258-201ENSMUST00000055593 1449 ntBASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Gm18688-201ENSMUST00000204695 1859 ntBASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Hfm1D3Z4R1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Hfm1D3Z4R1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Hfm1D3Z4R1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC25.65■■□□□ 1.7
Hfm1D3Z4R1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC25.65■■□□□ 1.7
Hfm1D3Z4R1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC25.65■■□□□ 1.7
Hfm1D3Z4R1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Hfm1D3Z4R1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Hfm1D3Z4R1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
Hfm1D3Z4R1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Hfm1D3Z4R1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Hfm1D3Z4R1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Hfm1D3Z4R1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Hfm1D3Z4R1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Hfm1D3Z4R1 Gm20634-201ENSMUST00000090779 2956 ntBASIC25.63■■□□□ 1.69
Hfm1D3Z4R1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Hfm1D3Z4R1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Hfm1D3Z4R1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC25.63■■□□□ 1.69
Hfm1D3Z4R1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC25.63■■□□□ 1.69
Hfm1D3Z4R1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Hfm1D3Z4R1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hfm1D3Z4R1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hfm1D3Z4R1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hfm1D3Z4R1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC25.62■■□□□ 1.69
Hfm1D3Z4R1 Gm9694-201ENSMUST00000193347 1189 ntBASIC25.62■■□□□ 1.69
Hfm1D3Z4R1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Hfm1D3Z4R1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC25.61■■□□□ 1.69
Hfm1D3Z4R1 Gm38345-201ENSMUST00000192635 1748 ntBASIC25.61■■□□□ 1.69
Hfm1D3Z4R1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hfm1D3Z4R1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hfm1D3Z4R1 Gm28033-201ENSMUST00000184224 96 ntBASIC25.61■■□□□ 1.69
Hfm1D3Z4R1 Gm7370-201ENSMUST00000219471 767 ntBASIC25.61■■□□□ 1.69
Hfm1D3Z4R1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hfm1D3Z4R1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Hfm1D3Z4R1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Gm5587-201ENSMUST00000206270 674 ntBASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Hfm1D3Z4R1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hfm1D3Z4R1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Hfm1D3Z4R1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Hfm1D3Z4R1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Hfm1D3Z4R1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Hfm1D3Z4R1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC25.58■■□□□ 1.69
Hfm1D3Z4R1 Gm7791-201ENSMUST00000219066 539 ntBASIC25.58■■□□□ 1.69
Hfm1D3Z4R1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Hfm1D3Z4R1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Hfm1D3Z4R1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Gm27704-201ENSMUST00000185094 107 ntBASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Hfm1D3Z4R1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Hfm1D3Z4R1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Hfm1D3Z4R1 Gm21559-201ENSMUST00000220638 855 ntBASIC25.56■■□□□ 1.68
Hfm1D3Z4R1 Gm8587-201ENSMUST00000076538 843 ntBASIC25.56■■□□□ 1.68
Hfm1D3Z4R1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Hfm1D3Z4R1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 Gm13474-201ENSMUST00000122466 815 ntBASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms