Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.21■□□□□ 0.67
Rfx8D3YU81 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx8D3YU81 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx8D3YU81 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfx8D3YU81 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.2■□□□□ 0.66
Rfx8D3YU81 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx8D3YU81 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Rab3c-203ENSMUST00000224180 967 ntBASIC19.2■□□□□ 0.66
Rfx8D3YU81 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rfx8D3YU81 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.2■□□□□ 0.66
Rfx8D3YU81 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.19■□□□□ 0.66
Rfx8D3YU81 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rfx8D3YU81 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.19■□□□□ 0.66
Rfx8D3YU81 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.19■□□□□ 0.66
Rfx8D3YU81 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx8D3YU81 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.18■□□□□ 0.66
Rfx8D3YU81 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.18■□□□□ 0.66
Rfx8D3YU81 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.18■□□□□ 0.66
Rfx8D3YU81 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx8D3YU81 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx8D3YU81 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx8D3YU81 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx8D3YU81 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx8D3YU81 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rfx8D3YU81 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx8D3YU81 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.15■□□□□ 0.66
Rfx8D3YU81 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.15■□□□□ 0.66
Rfx8D3YU81 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.15■□□□□ 0.66
Rfx8D3YU81 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx8D3YU81 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rfx8D3YU81 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rfx8D3YU81 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx8D3YU81 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx8D3YU81 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.13■□□□□ 0.65
Rfx8D3YU81 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rfx8D3YU81 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms