Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rrn3B2RS91 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rrn3B2RS91 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rrn3B2RS91 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rrn3B2RS91 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.22■□□□□ 0.51
Rrn3B2RS91 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Gm22325-201ENSMUST00000158904 308 ntBASIC18.22■□□□□ 0.51
Rrn3B2RS91 Gm44549-201ENSMUST00000208351 577 ntBASIC18.22■□□□□ 0.51
Rrn3B2RS91 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rrn3B2RS91 BC021767-201ENSMUST00000126387 1716 ntBASIC18.22■□□□□ 0.51
Rrn3B2RS91 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rrn3B2RS91 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.21■□□□□ 0.51
Rrn3B2RS91 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rrn3B2RS91 Grk6-206ENSMUST00000224995 2971 ntBASIC18.21■□□□□ 0.5
Rrn3B2RS91 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.2■□□□□ 0.5
Rrn3B2RS91 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rrn3B2RS91 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Gm2559-201ENSMUST00000201323 363 ntBASIC18.18■□□□□ 0.5
Rrn3B2RS91 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Rrn3B2RS91 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.18■□□□□ 0.5
Rrn3B2RS91 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rrn3B2RS91 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.17■□□□□ 0.5
Rrn3B2RS91 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.17■□□□□ 0.5
Rrn3B2RS91 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Gm20760-201ENSMUST00000179197 648 ntBASIC18.17■□□□□ 0.5
Rrn3B2RS91 Gm20049-201ENSMUST00000219950 730 ntBASIC18.17■□□□□ 0.5
Rrn3B2RS91 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.17■□□□□ 0.5
Rrn3B2RS91 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rrn3B2RS91 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms