Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp42B2RQC2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Usp42B2RQC2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp42B2RQC2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Gm11249-201ENSMUST00000117071 859 ntBASIC21.23■□□□□ 0.99
Usp42B2RQC2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Gm27275-201ENSMUST00000184318 272 ntBASIC21.23■□□□□ 0.99
Usp42B2RQC2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp42B2RQC2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Grk6-206ENSMUST00000224995 2971 ntBASIC21.22■□□□□ 0.99
Usp42B2RQC2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp42B2RQC2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp42B2RQC2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp42B2RQC2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp42B2RQC2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Usp42B2RQC2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Usp42B2RQC2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp42B2RQC2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp42B2RQC2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.2■□□□□ 0.98
Usp42B2RQC2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp42B2RQC2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp42B2RQC2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp42B2RQC2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp42B2RQC2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp42B2RQC2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp42B2RQC2 Gm37856-201ENSMUST00000191634 999 ntBASIC21.19■□□□□ 0.98
Usp42B2RQC2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp42B2RQC2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp42B2RQC2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms