Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn2aA0A0J9YTW6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scn2aA0A0J9YTW6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scn2aA0A0J9YTW6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scn2aA0A0J9YTW6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2aA0A0J9YTW6 Fst-202ENSMUST00000223640 2612 ntBASIC16.64■□□□□ 0.25
Scn2aA0A0J9YTW6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2aA0A0J9YTW6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2aA0A0J9YTW6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm11249-201ENSMUST00000117071 859 ntBASIC16.64■□□□□ 0.25
Scn2aA0A0J9YTW6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Scn2aA0A0J9YTW6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn2aA0A0J9YTW6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.64■□□□□ 0.25
Scn2aA0A0J9YTW6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scn2aA0A0J9YTW6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2aA0A0J9YTW6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms