Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv1A0A0B4J1G7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv1A0A0B4J1G7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Gm11421-201ENSMUST00000122124 294 ntBASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Smad6-203ENSMUST00000179458 273 ntBASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Serp2-204ENSMUST00000228055 705 ntBASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv1A0A0B4J1G7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv1A0A0B4J1G7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv1A0A0B4J1G7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv1A0A0B4J1G7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv1A0A0B4J1G7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv1A0A0B4J1G7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv1A0A0B4J1G7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms