Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Gm8969-201ENSMUST00000199694 526 ntBASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav1A0A075B5Z4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav1A0A075B5Z4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Gm18284-201ENSMUST00000172604 624 ntBASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav1A0A075B5Z4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav1A0A075B5Z4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Gm26571-201ENSMUST00000181399 666 ntBASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav1A0A075B5Z4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Gm6365-201ENSMUST00000054711 744 ntBASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav1A0A075B5Z4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav1A0A075B5Z4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav1A0A075B5Z4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Trav1A0A075B5Z4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.79■□□□□ 0.28
Trav1A0A075B5Z4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav1A0A075B5Z4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav1A0A075B5Z4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms