Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm10108-201ENSMUST00000078246 319 ntBASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim3Q9R1R2 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm13983-201ENSMUST00000118018 865 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm12135-201ENSMUST00000119170 466 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm12094-201ENSMUST00000121781 472 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm15187-201ENSMUST00000122329 264 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm26023-201ENSMUST00000122722 313 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm16298-201ENSMUST00000161107 420 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm20615-201ENSMUST00000177503 705 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm37966-201ENSMUST00000193122 326 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm17849-201ENSMUST00000219788 853 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.11□□□□□ -1.43
Trim3Q9R1R2 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim3Q9R1R2 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm26079-201ENSMUST00000104066 133 ntBASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm11318-201ENSMUST00000118640 961 ntBASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm12447-201ENSMUST00000119110 470 ntBASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim3Q9R1R2 Gm12540-201ENSMUST00000121938 319 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms