Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm12667-201ENSMUST00000118299 1332 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Igkv11-106-201ENSMUST00000103331 346 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm6746-201ENSMUST00000108774 483 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm16200-201ENSMUST00000120385 331 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Samd15-201ENSMUST00000169669 1194 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm2959-201ENSMUST00000169844 621 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm8669-201ENSMUST00000183839 945 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm5147-201ENSMUST00000185999 794 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm7986-201ENSMUST00000221336 551 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 AC140393.2-201ENSMUST00000226894 943 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 AC130547.1-201ENSMUST00000228079 1047 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr683-201ENSMUST00000061284 960 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Snora9-201ENSMUST00000082579 133 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm14990-201ENSMUST00000122354 445 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm23022-201ENSMUST00000158768 180 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm3208-201ENSMUST00000168281 427 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm29073-201ENSMUST00000185563 664 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm20813-201ENSMUST00000186646 705 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm21923-201ENSMUST00000188455 696 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm29165-201ENSMUST00000190655 664 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm29211-201ENSMUST00000191470 664 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm18752-201ENSMUST00000192876 608 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm43656-201ENSMUST00000197882 434 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Klra13-ps-203ENSMUST00000204367 850 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Gm3257-201ENSMUST00000207217 675 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 AC122901.2-201ENSMUST00000216926 285 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 AC102369.1-201ENSMUST00000218415 373 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim11Q99PQ2 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms