Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm14614-201ENSMUST00000119873 384 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm15316-201ENSMUST00000121082 421 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm24680-201ENSMUST00000158759 126 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm22533-201ENSMUST00000158821 274 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm2976-201ENSMUST00000160362 513 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm18833-201ENSMUST00000173218 862 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm7867-201ENSMUST00000189856 546 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm29214-201ENSMUST00000190216 570 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm43390-201ENSMUST00000196614 421 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm45070-201ENSMUST00000208100 246 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm9293-201ENSMUST00000223096 306 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdk5rap3Q99LM2 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm11501-201ENSMUST00000118039 581 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm12677-201ENSMUST00000118668 426 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm22276-201ENSMUST00000122469 129 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm25395-201ENSMUST00000157343 272 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Mir1981-201ENSMUST00000157934 82 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdk5rap3Q99LM2 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms