Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm16298-201ENSMUST00000161107 420 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm26509-201ENSMUST00000180947 948 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm37376-201ENSMUST00000192176 453 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm18839-201ENSMUST00000204292 670 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm17834-201ENSMUST00000204322 891 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm43216-201ENSMUST00000196295 1333 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 AU020206-202ENSMUST00000206358 3009 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm25332-201ENSMUST00000158038 105 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm22642-201ENSMUST00000175352 252 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm44361-201ENSMUST00000197960 94 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm19340-201ENSMUST00000221995 345 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Brf1Q8CFK2 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm26143-201ENSMUST00000104480 108 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm23884-201ENSMUST00000122687 294 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm23674-201ENSMUST00000157473 131 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm24682-201ENSMUST00000158764 137 ntBASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Brf1Q8CFK2 Gm3344-201ENSMUST00000169610 603 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms