Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm17121-201ENSMUST00000170414 847 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm18359-201ENSMUST00000173024 1459 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm17222-201ENSMUST00000180135 847 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm26595-201ENSMUST00000181585 484 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm32158-201ENSMUST00000200135 404 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm43867-201ENSMUST00000203860 525 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm18601-201ENSMUST00000220831 634 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm6436-201ENSMUST00000077163 451 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc28aQ8CEI3 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm14515-201ENSMUST00000121327 216 ntBASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm26509-201ENSMUST00000180947 948 ntBASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Mir6940-201ENSMUST00000183447 70 ntBASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.62□□□□□ -1.35
Ccdc28aQ8CEI3 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm25415-201ENSMUST00000104220 132 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm14733-201ENSMUST00000117680 133 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm8855-201ENSMUST00000118888 878 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm22025-201ENSMUST00000122734 302 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm43108-201ENSMUST00000200525 293 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm44380-201ENSMUST00000203125 293 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm32899-201ENSMUST00000219694 207 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm3785-201ENSMUST00000221000 202 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 Gm9321-201ENSMUST00000221179 778 ntBASIC6.61□□□□□ -1.35
Ccdc28aQ8CEI3 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms