Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm25757-201ENSMUST00000103986 123 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm26419-201ENSMUST00000104272 133 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm4234-201ENSMUST00000119747 714 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm4997-201ENSMUST00000154056 360 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm26211-201ENSMUST00000158578 129 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm25025-201ENSMUST00000175018 111 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Mir6348-201ENSMUST00000183804 120 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Mir6241-201ENSMUST00000184225 103 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm20813-201ENSMUST00000186646 705 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm21923-201ENSMUST00000188455 696 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm7412-201ENSMUST00000191692 605 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm17994-201ENSMUST00000209260 533 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm2975-201ENSMUST00000209710 820 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm7252-201ENSMUST00000223284 456 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 AC152940.1-201ENSMUST00000226504 139 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm17199-201ENSMUST00000097296 416 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm5605-201ENSMUST00000208940 1305 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm7129-201ENSMUST00000117402 997 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm13983-201ENSMUST00000118018 865 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm12937-201ENSMUST00000118333 448 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm8089-201ENSMUST00000122463 968 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm22214-201ENSMUST00000157563 172 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm7502-201ENSMUST00000169235 733 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm27014-201ENSMUST00000182658 937 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm18349-201ENSMUST00000187440 904 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm37966-201ENSMUST00000193122 326 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm42799-201ENSMUST00000201331 328 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm20274-201ENSMUST00000206967 584 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm45756-201ENSMUST00000212491 407 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 AC154634.3-201ENSMUST00000224589 736 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Arhgef33-207ENSMUST00000224966 490 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc28bQ8CEG5 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms