Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm7557-201ENSMUST00000221935 865 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 AC153971.1-201ENSMUST00000215097 3811 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm22710-201ENSMUST00000116892 125 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm14098-201ENSMUST00000119295 623 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm25782-201ENSMUST00000122526 289 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm6918-201ENSMUST00000167622 1222 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm20778-201ENSMUST00000178524 627 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm29778-201ENSMUST00000201667 466 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm30708-201ENSMUST00000202183 312 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm2040-201ENSMUST00000202979 289 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm5306-201ENSMUST00000203325 757 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
Usp47Q8BY87 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC8.99□□□□□ -0.97
Usp47Q8BY87 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Usp47Q8BY87 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp47Q8BY87 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Usp47Q8BY87 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm4342-201ENSMUST00000118982 367 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm16074-201ENSMUST00000119524 444 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm11198-201ENSMUST00000119771 974 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm12518-201ENSMUST00000122075 779 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm24179-201ENSMUST00000158925 127 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm8837-201ENSMUST00000161037 1107 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usp47Q8BY87 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm18851-201ENSMUST00000210087 1058 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Usp47Q8BY87 Gm25515-201ENSMUST00000083858 157 ntBASIC8.98□□□□□ -0.97
Usp47Q8BY87 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usp47Q8BY87 AC156636.2-201ENSMUST00000218845 4557 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm12388-201ENSMUST00000119112 1887 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm37953-201ENSMUST00000195293 1884 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm13772-201ENSMUST00000118431 317 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm6446-201ENSMUST00000120604 818 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm28443-201ENSMUST00000189081 698 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm3544-201ENSMUST00000196129 305 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm43561-201ENSMUST00000199866 448 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Usp47Q8BY87 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms