Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm11545-201ENSMUST00000146507 375 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm26046-201ENSMUST00000157312 166 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm25057-201ENSMUST00000157366 88 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim50Q810I2 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim50Q810I2 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm18447-201ENSMUST00000187501 307 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm2229-201ENSMUST00000193328 710 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm19088-201ENSMUST00000198800 566 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim50Q810I2 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.3□□□□□ -1.4
Trim50Q810I2 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm8607-201ENSMUST00000221864 431 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim50Q810I2 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim50Q810I2 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim50Q810I2 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim50Q810I2 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim50Q810I2 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.3□□□□□ -1.4
Trim50Q810I2 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 AU020206-202ENSMUST00000206358 3009 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm13604-201ENSMUST00000119332 482 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm5843-201ENSMUST00000121631 476 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm24682-201ENSMUST00000158764 137 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm3140-201ENSMUST00000163523 481 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm6047-201ENSMUST00000167221 574 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm25675-201ENSMUST00000174979 118 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm43849-201ENSMUST00000201086 215 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm5418-201ENSMUST00000206932 528 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm2767-201ENSMUST00000209582 473 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm45514-201ENSMUST00000211531 689 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm7769-201ENSMUST00000212900 933 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim50Q810I2 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.29□□□□□ -1.4
Trim50Q810I2 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim50Q810I2 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms