Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm26143-201ENSMUST00000104480 108 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm11198-201ENSMUST00000119771 974 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm14805-201ENSMUST00000120172 340 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm15781-201ENSMUST00000120216 323 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm15225-201ENSMUST00000120449 1017 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm36994-201ENSMUST00000192941 492 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm37517-201ENSMUST00000194004 1289 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm9517-201ENSMUST00000195021 874 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm42919-201ENSMUST00000197753 1284 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Trdv3-201ENSMUST00000198551 309 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm36448-201ENSMUST00000199916 438 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm3213-201ENSMUST00000219296 441 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.55□□□□□ -1.2
Ddx55Q6ZPL9 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm26067-201ENSMUST00000103789 110 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm13430-201ENSMUST00000121366 288 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm22820-201ENSMUST00000157205 329 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm24719-201ENSMUST00000157520 110 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm23632-201ENSMUST00000175289 125 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm27960-201ENSMUST00000183445 184 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm28934-201ENSMUST00000186491 346 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm29357-201ENSMUST00000186877 698 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm37493-201ENSMUST00000193167 433 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 AC161250.1-201ENSMUST00000213426 1111 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 AC153532.1-201ENSMUST00000218126 1111 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 560 ms