Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Nup98Q6PFD9 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Nup98Q6PFD9 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Nup98Q6PFD9 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm23910-201ENSMUST00000104597 132 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Mir466j-201ENSMUST00000116876 122 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm22724-201ENSMUST00000158091 127 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm9597-201ENSMUST00000171913 602 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Mir5110-201ENSMUST00000175537 87 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm44221-201ENSMUST00000203552 388 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Mir298-201ENSMUST00000083476 82 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm9930-201ENSMUST00000066742 3151 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm14783-201ENSMUST00000118900 663 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm13013-201ENSMUST00000119087 523 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm22235-201ENSMUST00000157085 110 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm23408-201ENSMUST00000158523 265 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Mir7037-201ENSMUST00000184414 65 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm28934-201ENSMUST00000186491 346 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm42619-201ENSMUST00000197564 1136 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm4510-201ENSMUST00000218265 427 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Thap6-201ENSMUST00000191860 3151 ntBASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nup98Q6PFD9 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 AC122881.1-201ENSMUST00000225757 2695 ntBASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Gm13811-201ENSMUST00000117800 256 ntBASIC7.44□□□□□ -1.22
Nup98Q6PFD9 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Gm38122-201ENSMUST00000192679 885 ntBASIC7.44□□□□□ -1.22
Nup98Q6PFD9 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 AC163664.2-201ENSMUST00000228894 459 ntBASIC7.44□□□□□ -1.22
Nup98Q6PFD9 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
Nup98Q6PFD9 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.43□□□□□ -1.22
Nup98Q6PFD9 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Nup98Q6PFD9 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms