Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm12876-201ENSMUST00000120975 408 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm14143-201ENSMUST00000121686 357 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm15141-201ENSMUST00000121860 729 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm14251-201ENSMUST00000122133 279 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm23068-201ENSMUST00000158239 293 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm25767-201ENSMUST00000158572 124 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm23823-201ENSMUST00000158740 124 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm18833-201ENSMUST00000173218 862 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm7094-201ENSMUST00000178379 366 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Ppp1r2-ps7-202ENSMUST00000185057 763 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Scgb1b12-201ENSMUST00000188355 417 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm43797-201ENSMUST00000198221 532 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm43145-201ENSMUST00000198963 628 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm8041-201ENSMUST00000199755 616 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm44794-201ENSMUST00000206550 411 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm44852-201ENSMUST00000207950 369 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm45877-201ENSMUST00000212110 564 ntTSL 3 BASIC6.19□□□□□ -1.42
Foxc1Q61572 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm9118-201ENSMUST00000219246 754 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 CT025603.3-201ENSMUST00000224031 419 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 AC154767.1-201ENSMUST00000224669 358 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Fxyd2-201ENSMUST00000041005 632 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Nnt-202ENSMUST00000099149 3464 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Enox2-203ENSMUST00000114912 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Olfm5-201ENSMUST00000051137 2268 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Trmt2b-202ENSMUST00000087541 3119 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Ctdsp2-201ENSMUST00000105255 4136 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm43280-201ENSMUST00000202958 1550 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 AC154461.2-201ENSMUST00000225462 1980 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm14258-201ENSMUST00000144607 2031 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm9165-201ENSMUST00000208467 2044 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 CT009757.2-201ENSMUST00000220806 2028 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Cyp2j9-201ENSMUST00000055693 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Ctnna3-203ENSMUST00000105441 2907 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Kbtbd4-202ENSMUST00000111464 2343 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm14001-201ENSMUST00000118847 247 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm5319-201ENSMUST00000118965 873 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm13237-201ENSMUST00000122151 635 ntBASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.18□□□□□ -1.42
Foxc1Q61572 Gm26070-201ENSMUST00000157500 137 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 180.4 ms