Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Gm8183-201ENSMUST00000183134 980 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Gm18700-201ENSMUST00000185791 553 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CiitaP79621 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CiitaP79621 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.07□□□□□ -1.28
CiitaP79621 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.07□□□□□ -1.28
CiitaP79621 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.07□□□□□ -1.28
CiitaP79621 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CiitaP79621 Gm22581-201ENSMUST00000083735 136 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CiitaP79621 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CiitaP79621 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
CiitaP79621 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CiitaP79621 Gm19210-201ENSMUST00000199562 1350 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.07□□□□□ -1.28
CiitaP79621 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CiitaP79621 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CiitaP79621 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 Gm13702-201ENSMUST00000118542 825 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Gm7058-201ENSMUST00000119209 902 ntBASIC7.06□□□□□ -1.28
CiitaP79621 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CiitaP79621 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 Gm28918-201ENSMUST00000188822 699 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Gm37809-201ENSMUST00000195050 931 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.06□□□□□ -1.28
CiitaP79621 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.06□□□□□ -1.28
CiitaP79621 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.06□□□□□ -1.28
CiitaP79621 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CiitaP79621 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.06□□□□□ -1.28
CiitaP79621 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CiitaP79621 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CiitaP79621 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CiitaP79621 AC131667.1-201ENSMUST00000214665 2175 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CiitaP79621 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.06□□□□□ -1.28
CiitaP79621 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Gm38081-201ENSMUST00000192680 1645 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.05□□□□□ -1.28
CiitaP79621 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Gm22103-201ENSMUST00000116733 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm26475-201ENSMUST00000116769 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm23620-201ENSMUST00000116812 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm25042-201ENSMUST00000116856 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm25540-201ENSMUST00000116880 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm12438-201ENSMUST00000122034 336 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm12152-201ENSMUST00000122465 684 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Gm25057-201ENSMUST00000157366 88 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm25219-201ENSMUST00000157545 330 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm23207-201ENSMUST00000158665 102 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm18833-201ENSMUST00000173218 862 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm23550-201ENSMUST00000179003 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm25123-201ENSMUST00000179154 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm25353-201ENSMUST00000179366 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm22992-201ENSMUST00000179496 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm25892-201ENSMUST00000179867 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Gm24092-201ENSMUST00000180257 121 ntBASIC7.05□□□□□ -1.28
CiitaP79621 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CiitaP79621 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CiitaP79621 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.05□□□□□ -1.28
CiitaP79621 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CiitaP79621 Gm2602-201ENSMUST00000202112 571 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms