Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm13260-201ENSMUST00000117797 1264 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm15152-201ENSMUST00000121540 394 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm15843-201ENSMUST00000146593 529 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm26238-201ENSMUST00000175538 117 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.42□□□□□ -1.54
Ufd1P70362 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm28975-201ENSMUST00000186412 686 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm37511-201ENSMUST00000192901 294 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm6236-201ENSMUST00000193785 1009 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm38305-201ENSMUST00000194825 223 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm43387-201ENSMUST00000196896 1066 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm43141-201ENSMUST00000199695 274 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm43243-201ENSMUST00000199964 278 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm4032-201ENSMUST00000210886 487 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.42□□□□□ -1.54
Ufd1P70362 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC5.42□□□□□ -1.54
Ufd1P70362 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Ufd1P70362 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.42□□□□□ -1.54
Ufd1P70362 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ufd1P70362 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.42□□□□□ -1.54
Ufd1P70362 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ufd1P70362 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm23748-201ENSMUST00000104227 131 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm26416-201ENSMUST00000104280 134 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Ufd1P70362 Gm12189-201ENSMUST00000119779 912 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm13486-201ENSMUST00000119910 282 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm12115-201ENSMUST00000119969 447 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm22276-201ENSMUST00000122469 129 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Gm26183-201ENSMUST00000157685 139 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm24186-201ENSMUST00000157983 127 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm16112-201ENSMUST00000159075 382 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm9529-201ENSMUST00000177598 579 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm23139-201ENSMUST00000179454 132 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm5181-201ENSMUST00000183140 971 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC5.41□□□□□ -1.54
Ufd1P70362 Ighv5-1-201ENSMUST00000193324 353 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.41□□□□□ -1.54
Ufd1P70362 Gm42799-201ENSMUST00000201331 328 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Gm45198-201ENSMUST00000206796 591 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm18060-201ENSMUST00000207407 564 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm45343-201ENSMUST00000210452 828 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ufd1P70362 Gm2996-201ENSMUST00000211398 537 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Gm5948-201ENSMUST00000219627 839 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 AC118006.3-201ENSMUST00000223948 1176 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 AC154747.4-201ENSMUST00000224802 903 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ufd1P70362 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Mir24-2-201ENSMUST00000083607 107 ntBASIC5.41□□□□□ -1.54
Ufd1P70362 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ufd1P70362 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ufd1P70362 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ufd1P70362 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ufd1P70362 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms