Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Msh6P54276 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Msh6P54276 Gm15781-201ENSMUST00000120216 323 ntBASIC8.21□□□□□ -1.1
Msh6P54276 Gm11498-201ENSMUST00000120660 949 ntBASIC8.21□□□□□ -1.1
Msh6P54276 Gm14237-201ENSMUST00000122080 430 ntBASIC8.21□□□□□ -1.1
Msh6P54276 Gm25363-201ENSMUST00000158850 245 ntBASIC8.21□□□□□ -1.1
Msh6P54276 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Msh6P54276 Gm28934-201ENSMUST00000186491 346 ntBASIC8.21□□□□□ -1.1
Msh6P54276 Gm4332-201ENSMUST00000196114 346 ntBASIC8.21□□□□□ -1.1
Msh6P54276 Gm18592-201ENSMUST00000221529 276 ntBASIC8.21□□□□□ -1.1
Msh6P54276 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Msh6P54276 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Msh6P54276 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Msh6P54276 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.21□□□□□ -1.1
Msh6P54276 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.2□□□□□ -1.1
Msh6P54276 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Msh6P54276 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Msh6P54276 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Msh6P54276 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Msh6P54276 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Msh6P54276 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC8.2□□□□□ -1.1
Msh6P54276 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Msh6P54276 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC8.2□□□□□ -1.1
Msh6P54276 Gm13641-201ENSMUST00000117993 473 ntBASIC8.2□□□□□ -1.1
Msh6P54276 Gm14900-201ENSMUST00000120304 733 ntBASIC8.2□□□□□ -1.1
Msh6P54276 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC8.2□□□□□ -1.1
Msh6P54276 Gm22094-201ENSMUST00000158976 117 ntBASIC8.2□□□□□ -1.1
Msh6P54276 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Msh6P54276 Gm2539-203ENSMUST00000181352 746 ntBASIC8.2□□□□□ -1.1
Msh6P54276 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Msh6P54276 Gm7663-201ENSMUST00000201151 1240 ntBASIC8.2□□□□□ -1.1
Msh6P54276 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Msh6P54276 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC8.2□□□□□ -1.1
Msh6P54276 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Msh6P54276 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Msh6P54276 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Msh6P54276 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Msh6P54276 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Msh6P54276 Gm45073-201ENSMUST00000207688 4247 ntBASIC8.19□□□□□ -1.1
Msh6P54276 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Msh6P54276 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Msh6P54276 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Msh6P54276 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.19□□□□□ -1.1
Msh6P54276 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Msh6P54276 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Msh6P54276 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Msh6P54276 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Msh6P54276 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Mir700-201ENSMUST00000102169 79 ntBASIC8.19□□□□□ -1.1
Msh6P54276 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Gm25057-201ENSMUST00000157366 88 ntBASIC8.19□□□□□ -1.1
Msh6P54276 Gm16164-201ENSMUST00000160078 468 ntBASIC8.19□□□□□ -1.1
Msh6P54276 Gm18199-201ENSMUST00000173820 835 ntBASIC8.19□□□□□ -1.1
Msh6P54276 Gm7570-201ENSMUST00000215246 698 ntBASIC8.19□□□□□ -1.1
Msh6P54276 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 AC127242.4-201ENSMUST00000221242 470 ntBASIC8.19□□□□□ -1.1
Msh6P54276 AC154646.1-201ENSMUST00000225011 1092 ntBASIC8.19□□□□□ -1.1
Msh6P54276 AC116319.2-201ENSMUST00000228159 984 ntBASIC8.19□□□□□ -1.1
Msh6P54276 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Msh6P54276 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Msh6P54276 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Gm37086-201ENSMUST00000193082 3452 ntBASIC8.19□□□□□ -1.1
Msh6P54276 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.19□□□□□ -1.1
Msh6P54276 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Msh6P54276 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Msh6P54276 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Msh6P54276 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Msh6P54276 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Msh6P54276 Gm33167-201ENSMUST00000201933 2643 ntBASIC8.18□□□□□ -1.1
Msh6P54276 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Msh6P54276 Gm11242-201ENSMUST00000120103 2457 ntBASIC8.18□□□□□ -1.1
Msh6P54276 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Msh6P54276 Gm9519-201ENSMUST00000206108 1337 ntBASIC8.18□□□□□ -1.1
Msh6P54276 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC8.18□□□□□ -1.1
Msh6P54276 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Msh6P54276 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Msh6P54276 Gm37735-201ENSMUST00000193995 1406 ntBASIC8.18□□□□□ -1.1
Msh6P54276 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Msh6P54276 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Msh6P54276 Gm23485-201ENSMUST00000104181 155 ntBASIC8.18□□□□□ -1.1
Msh6P54276 Gm11976-201ENSMUST00000119236 295 ntBASIC8.18□□□□□ -1.1
Msh6P54276 Gm11848-201ENSMUST00000121207 973 ntBASIC8.18□□□□□ -1.1
Msh6P54276 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Msh6P54276 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Msh6P54276 Gm27024-201ENSMUST00000182561 755 ntBASIC8.18□□□□□ -1.1
Msh6P54276 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC8.18□□□□□ -1.1
Msh6P54276 Gm8869-201ENSMUST00000195222 947 ntBASIC8.18□□□□□ -1.1
Msh6P54276 Gm3544-201ENSMUST00000196129 305 ntBASIC8.18□□□□□ -1.1
Msh6P54276 AC157822.1-201ENSMUST00000196643 80 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms