Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shmt1P50431 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Shmt1P50431 Gm18781-201ENSMUST00000211252 924 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC7.05□□□□□ -1.28
Shmt1P50431 Gm17849-201ENSMUST00000219788 853 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Shmt1P50431 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC7.05□□□□□ -1.28
Shmt1P50431 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 AC102352.1-201ENSMUST00000224187 582 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 AC164295.1-201ENSMUST00000224861 186 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.05□□□□□ -1.28
Shmt1P50431 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Shmt1P50431 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Shmt1P50431 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Shmt1P50431 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Shmt1P50431 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Shmt1P50431 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shmt1P50431 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Shmt1P50431 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Shmt1P50431 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.05□□□□□ -1.28
Shmt1P50431 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shmt1P50431 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Shmt1P50431 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Shmt1P50431 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.05□□□□□ -1.28
Shmt1P50431 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shmt1P50431 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Shmt1P50431 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Shmt1P50431 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Shmt1P50431 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm22267-201ENSMUST00000104008 131 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm26079-201ENSMUST00000104066 133 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm22543-201ENSMUST00000104347 94 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.04□□□□□ -1.28
Shmt1P50431 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm15149-201ENSMUST00000119370 360 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm4997-201ENSMUST00000154056 360 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm20454-201ENSMUST00000172713 221 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.04□□□□□ -1.28
Shmt1P50431 Mir7046-201ENSMUST00000183435 66 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm29197-201ENSMUST00000185922 702 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm37189-201ENSMUST00000192131 298 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm36966-201ENSMUST00000192217 413 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm19039-201ENSMUST00000204363 575 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm5324-201ENSMUST00000208115 476 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.04□□□□□ -1.28
Shmt1P50431 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm18620-201ENSMUST00000222295 324 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Shmt1P50431 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Shmt1P50431 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm23058-201ENSMUST00000093703 107 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Shmt1P50431 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.04□□□□□ -1.28
Shmt1P50431 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Shmt1P50431 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.04□□□□□ -1.28
Shmt1P50431 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Shmt1P50431 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms