Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Brca1P48754 Gm12399-201ENSMUST00000121475 446 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC7.22□□□□□ -1.25
Brca1P48754 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Brca1P48754 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Brca1P48754 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 Gm38181-201ENSMUST00000181357 720 ntBASIC7.22□□□□□ -1.25
Brca1P48754 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 Gm29454-201ENSMUST00000190805 393 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gm37806-201ENSMUST00000194524 6387 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gm37196-201ENSMUST00000194762 906 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gm37235-201ENSMUST00000195171 59 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gm5318-201ENSMUST00000205249 406 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.22□□□□□ -1.25
Brca1P48754 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC7.22□□□□□ -1.25
Brca1P48754 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.22□□□□□ -1.25
Brca1P48754 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 Gm7780-201ENSMUST00000214787 406 ntBASIC7.22□□□□□ -1.25
Brca1P48754 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Brca1P48754 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Brca1P48754 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Brca1P48754 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.22□□□□□ -1.25
Brca1P48754 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Brca1P48754 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Brca1P48754 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC7.21□□□□□ -1.25
Brca1P48754 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Brca1P48754 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Brca1P48754 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Brca1P48754 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Gm13604-201ENSMUST00000119332 482 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Gm13245-201ENSMUST00000119646 260 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Gm14267-201ENSMUST00000119751 496 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Gm11498-201ENSMUST00000120660 949 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Gm24741-201ENSMUST00000158857 106 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Mir3080-201ENSMUST00000175010 79 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Mir3110-201ENSMUST00000175053 80 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brca1P48754 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Brca1P48754 Gm45724-201ENSMUST00000213031 420 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Gm9237-201ENSMUST00000221499 548 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Gm9202-201ENSMUST00000223036 437 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Brca1P48754 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Brca1P48754 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Brca1P48754 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC7.21□□□□□ -1.26
Brca1P48754 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
Brca1P48754 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Brca1P48754 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Brca1P48754 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Brca1P48754 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.21□□□□□ -1.26
Brca1P48754 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Brca1P48754 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brca1P48754 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brca1P48754 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brca1P48754 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.2□□□□□ -1.26
Brca1P48754 Gm25152-201ENSMUST00000157117 114 ntBASIC7.2□□□□□ -1.26
Brca1P48754 Gm25603-201ENSMUST00000158361 105 ntBASIC7.2□□□□□ -1.26
Brca1P48754 Mir3062-201ENSMUST00000174986 105 ntBASIC7.2□□□□□ -1.26
Brca1P48754 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Brca1P48754 Gm5947-201ENSMUST00000179156 714 ntBASIC7.2□□□□□ -1.26
Brca1P48754 Gm5645-201ENSMUST00000179597 714 ntBASIC7.2□□□□□ -1.26
Brca1P48754 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.2□□□□□ -1.26
Brca1P48754 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC7.2□□□□□ -1.26
Brca1P48754 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Brca1P48754 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Brca1P48754 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Brca1P48754 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.2□□□□□ -1.26
Brca1P48754 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Brca1P48754 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Brca1P48754 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Brca1P48754 Gm10652-201ENSMUST00000199790 2622 ntBASIC7.2□□□□□ -1.26
Brca1P48754 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Brca1P48754 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.2□□□□□ -1.26
Brca1P48754 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms