Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Thap6-201ENSMUST00000191860 3151 ntBASIC6.55□□□□□ -1.36
HttP42859 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HttP42859 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.54□□□□□ -1.36
HttP42859 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.54□□□□□ -1.36
HttP42859 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Gm23774-201ENSMUST00000158990 131 ntBASIC6.54□□□□□ -1.36
HttP42859 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.54□□□□□ -1.36
HttP42859 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Gm7733-201ENSMUST00000199038 919 ntBASIC6.54□□□□□ -1.36
HttP42859 Zfp429-203ENSMUST00000224684 524 ntBASIC6.54□□□□□ -1.36
HttP42859 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
HttP42859 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.54□□□□□ -1.36
HttP42859 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.54□□□□□ -1.36
HttP42859 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.54□□□□□ -1.36
HttP42859 Gm29284-201ENSMUST00000188363 255 ntBASIC6.54□□□□□ -1.36
HttP42859 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.54□□□□□ -1.36
HttP42859 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.54□□□□□ -1.36
HttP42859 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.54□□□□□ -1.36
HttP42859 Mir412-201ENSMUST00000083636 80 ntBASIC6.54□□□□□ -1.36
HttP42859 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HttP42859 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HttP42859 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.54□□□□□ -1.36
HttP42859 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
HttP42859 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.54□□□□□ -1.36
HttP42859 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.54□□□□□ -1.36
HttP42859 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Gm13491-201ENSMUST00000118267 235 ntBASIC6.54□□□□□ -1.36
HttP42859 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.54□□□□□ -1.36
HttP42859 Gm13488-201ENSMUST00000120419 179 ntBASIC6.54□□□□□ -1.36
HttP42859 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.54□□□□□ -1.36
HttP42859 Gm14796-201ENSMUST00000121216 959 ntBASIC6.54□□□□□ -1.36
HttP42859 Gm23513-201ENSMUST00000158181 133 ntBASIC6.54□□□□□ -1.36
HttP42859 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.54□□□□□ -1.36
HttP42859 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.54□□□□□ -1.36
HttP42859 Gm18904-201ENSMUST00000218756 329 ntBASIC6.54□□□□□ -1.36
HttP42859 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HttP42859 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.54□□□□□ -1.36
HttP42859 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.53□□□□□ -1.36
HttP42859 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.53□□□□□ -1.36
HttP42859 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HttP42859 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Gm29755-201ENSMUST00000196976 948 ntBASIC6.53□□□□□ -1.36
HttP42859 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.53□□□□□ -1.36
HttP42859 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.53□□□□□ -1.36
HttP42859 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HttP42859 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC6.53□□□□□ -1.36
HttP42859 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC6.53□□□□□ -1.36
HttP42859 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Gm37924-201ENSMUST00000195470 3647 ntBASIC6.53□□□□□ -1.36
HttP42859 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.53□□□□□ -1.36
HttP42859 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.53□□□□□ -1.36
HttP42859 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.53□□□□□ -1.36
HttP42859 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC6.53□□□□□ -1.36
HttP42859 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HttP42859 Gm44902-201ENSMUST00000206177 805 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms