Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Gm22277-201ENSMUST00000157204 277 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Gm26312-201ENSMUST00000157769 165 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Gm24295-201ENSMUST00000158298 131 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC9.53□□□□□ -0.88
Chd1P40201 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Gm8039-201ENSMUST00000204758 712 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC9.53□□□□□ -0.88
Chd1P40201 AC192088.3-201ENSMUST00000227858 831 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Chd1P40201 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Chd1P40201 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Chd1P40201 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC9.53□□□□□ -0.88
Chd1P40201 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Chd1P40201 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Chd1P40201 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Gm38085-201ENSMUST00000195785 3062 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC9.53□□□□□ -0.88
Chd1P40201 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Chd1P40201 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Chd1P40201 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 AC156645.1-201ENSMUST00000223066 5194 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Chd1P40201 Mir449c-201ENSMUST00000102192 109 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Gm22867-201ENSMUST00000157499 109 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Gm45032-201ENSMUST00000205375 520 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Gm40598-201ENSMUST00000222953 547 ntBASIC9.53□□□□□ -0.88
Chd1P40201 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Chd1P40201 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd1P40201 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC9.52□□□□□ -0.88
Chd1P40201 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chd1P40201 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chd1P40201 Gm42661-201ENSMUST00000202364 1442 ntBASIC9.52□□□□□ -0.88
Chd1P40201 Gm42561-201ENSMUST00000202563 1442 ntBASIC9.52□□□□□ -0.88
Chd1P40201 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Chd1P40201 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC9.52□□□□□ -0.89
Chd1P40201 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Chd1P40201 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Chd1P40201 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Chd1P40201 M6pr-ps-201ENSMUST00000120481 830 ntBASIC9.52□□□□□ -0.89
Chd1P40201 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Chd1P40201 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC9.52□□□□□ -0.89
Chd1P40201 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC9.52□□□□□ -0.89
Chd1P40201 Gm21399-201ENSMUST00000180210 597 ntBASIC9.52□□□□□ -0.89
Chd1P40201 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Gm5318-201ENSMUST00000205249 406 ntBASIC9.52□□□□□ -0.89
Chd1P40201 Gm23737-201ENSMUST00000082547 159 ntBASIC9.52□□□□□ -0.89
Chd1P40201 Mir133b-201ENSMUST00000083546 119 ntBASIC9.52□□□□□ -0.89
Chd1P40201 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Chd1P40201 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd1P40201 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 AC098728.1-202ENSMUST00000226656 2198 ntBASIC9.51□□□□□ -0.89
Chd1P40201 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
Chd1P40201 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
Chd1P40201 Gm13033-201ENSMUST00000117591 1057 ntBASIC9.51□□□□□ -0.89
Chd1P40201 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Chd1P40201 Gm9671-201ENSMUST00000171502 547 ntBASIC9.51□□□□□ -0.89
Chd1P40201 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC9.51□□□□□ -0.89
Chd1P40201 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC9.51□□□□□ -0.89
Chd1P40201 Gm18800-202ENSMUST00000188688 1105 ntBASIC9.51□□□□□ -0.89
Chd1P40201 Gm17934-201ENSMUST00000192818 422 ntBASIC9.51□□□□□ -0.89
Chd1P40201 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC9.51□□□□□ -0.89
Chd1P40201 Gm7780-201ENSMUST00000214787 406 ntBASIC9.51□□□□□ -0.89
Chd1P40201 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC9.51□□□□□ -0.89
Chd1P40201 Gm5087-204ENSMUST00000225820 645 ntBASIC9.51□□□□□ -0.89
Chd1P40201 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd1P40201 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms