Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm28846-201ENSMUST00000189161 368 ntBASIC5.72□□□□□ -1.49
P20040 Gm18849-201ENSMUST00000189861 560 ntBASIC5.72□□□□□ -1.49
P20040 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.72□□□□□ -1.49
P20040 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.72□□□□□ -1.49
P20040 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.72□□□□□ -1.49
P20040 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC5.72□□□□□ -1.49
P20040 Gm4751-201ENSMUST00000200620 1105 ntBASIC5.72□□□□□ -1.49
P20040 Gm7463-201ENSMUST00000201541 547 ntBASIC5.72□□□□□ -1.49
P20040 Gm44856-201ENSMUST00000206639 304 ntBASIC5.72□□□□□ -1.49
P20040 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.72□□□□□ -1.49
P20040 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.72□□□□□ -1.49
P20040 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.72□□□□□ -1.49
P20040 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.72□□□□□ -1.49
P20040 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.72□□□□□ -1.49
P20040 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.72□□□□□ -1.49
P20040 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.72□□□□□ -1.49
P20040 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
P20040 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.72□□□□□ -1.49
P20040 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.72□□□□□ -1.49
P20040 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
P20040 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
P20040 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
P20040 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
P20040 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
P20040 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
P20040 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
P20040 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
P20040 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
P20040 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
P20040 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
P20040 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
P20040 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
P20040 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
P20040 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
P20040 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 AU020206-202ENSMUST00000206358 3009 ntBASIC5.71□□□□□ -1.5
P20040 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
P20040 Gm22231-201ENSMUST00000101027 73 ntBASIC5.71□□□□□ -1.5
P20040 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
P20040 Gm13156-201ENSMUST00000118348 321 ntBASIC5.71□□□□□ -1.5
P20040 Gm11976-201ENSMUST00000119236 295 ntBASIC5.71□□□□□ -1.5
P20040 Gm15149-201ENSMUST00000119370 360 ntBASIC5.71□□□□□ -1.5
P20040 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
P20040 Gm14863-201ENSMUST00000119648 307 ntBASIC5.71□□□□□ -1.5
P20040 Gm11553-201ENSMUST00000120682 240 ntBASIC5.71□□□□□ -1.5
P20040 Gm15349-201ENSMUST00000121154 204 ntBASIC5.71□□□□□ -1.5
P20040 Gm12540-201ENSMUST00000121938 319 ntBASIC5.71□□□□□ -1.5
P20040 Gm8577-201ENSMUST00000122420 986 ntBASIC5.71□□□□□ -1.5
P20040 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC5.71□□□□□ -1.5
P20040 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.71□□□□□ -1.5
P20040 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Gm27152-201ENSMUST00000183828 99 ntBASIC5.71□□□□□ -1.5
P20040 Gm27507-201ENSMUST00000184199 93 ntBASIC5.71□□□□□ -1.5
P20040 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Gm38291-201ENSMUST00000193671 259 ntBASIC5.71□□□□□ -1.5
P20040 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.71□□□□□ -1.5
P20040 Gm43689-201ENSMUST00000195951 427 ntBASIC5.71□□□□□ -1.5
P20040 Gm43390-201ENSMUST00000196614 421 ntBASIC5.71□□□□□ -1.5
P20040 Gm5050-201ENSMUST00000197164 775 ntBASIC5.71□□□□□ -1.5
P20040 Gm43929-201ENSMUST00000203025 409 ntBASIC5.71□□□□□ -1.5
P20040 Gm9367-201ENSMUST00000205703 546 ntBASIC5.71□□□□□ -1.5
P20040 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.71□□□□□ -1.5
P20040 Gm45693-201ENSMUST00000211391 1157 ntBASIC5.71□□□□□ -1.5
P20040 Gm6562-201ENSMUST00000221903 464 ntBASIC5.71□□□□□ -1.5
P20040 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.71□□□□□ -1.5
P20040 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.71□□□□□ -1.5
P20040 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.71□□□□□ -1.5
P20040 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
P20040 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.71□□□□□ -1.5
P20040 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.71□□□□□ -1.5
P20040 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
P20040 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
P20040 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
P20040 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
P20040 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
P20040 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.7□□□□□ -1.5
P20040 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.7□□□□□ -1.5
P20040 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.7□□□□□ -1.5
P20040 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.7□□□□□ -1.5
P20040 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
P20040 Gm26146-201ENSMUST00000104478 185 ntBASIC5.7□□□□□ -1.5
P20040 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms