Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm26381-201ENSMUST00000174895 92 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Gm5244-202ENSMUST00000189517 743 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Gm4556-201ENSMUST00000217808 355 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Gm19154-201ENSMUST00000223330 940 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
Chmp6P0C0A3 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm13176-201ENSMUST00000117910 477 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm5793-201ENSMUST00000119393 630 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm15164-201ENSMUST00000122203 271 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm8648-201ENSMUST00000122457 221 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm8550-201ENSMUST00000161621 653 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm24812-201ENSMUST00000175315 284 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm18447-201ENSMUST00000187501 307 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm2229-201ENSMUST00000193328 710 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm43048-201ENSMUST00000196101 388 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm5928-201ENSMUST00000221839 466 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm21731-201ENSMUST00000079524 489 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Chmp6P0C0A3 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.97□□□□□ -1.29
Chmp6P0C0A3 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Chmp6P0C0A3 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.29
Chmp6P0C0A3 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.96□□□□□ -1.29
Chmp6P0C0A3 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.96□□□□□ -1.29
Chmp6P0C0A3 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Chmp6P0C0A3 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Chmp6P0C0A3 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.96□□□□□ -1.3
Chmp6P0C0A3 Gm15621-201ENSMUST00000119162 364 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms