Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC122887.1-201ENSMUST00000219265 2722 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Mrpl48-201ENSMUST00000064334 1865 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm44835-201ENSMUST00000205544 3181 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 AC160340.1-201ENSMUST00000222952 3964 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm22271-201ENSMUST00000104035 128 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm12878-201ENSMUST00000118744 332 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm13245-201ENSMUST00000119646 260 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm15452-201ENSMUST00000119877 240 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm7700-201ENSMUST00000120273 970 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm12104-201ENSMUST00000120359 979 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm24910-201ENSMUST00000157289 272 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm22675-201ENSMUST00000158430 104 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm24899-201ENSMUST00000158892 73 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm15946-201ENSMUST00000160654 423 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm9399-201ENSMUST00000175771 639 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm25947-201ENSMUST00000180343 110 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm28615-201ENSMUST00000187527 482 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm19280-201ENSMUST00000190191 205 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm29462-201ENSMUST00000191458 288 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm17970-201ENSMUST00000192199 685 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm42431-201ENSMUST00000196880 323 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm8748-201ENSMUST00000211125 587 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm18644-201ENSMUST00000211458 815 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm45756-201ENSMUST00000212491 407 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm7530-201ENSMUST00000218466 605 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 CT009515.2-201ENSMUST00000226126 736 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm5619-201ENSMUST00000071172 760 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Olfr512-201ENSMUST00000074730 1056 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm23975-201ENSMUST00000082685 106 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms