Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm26323-201ENSMUST00000157743 175 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Mir7674-201ENSMUST00000184964 63 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm28377-201ENSMUST00000189695 720 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm18303-201ENSMUST00000190055 1176 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm37187-201ENSMUST00000193425 341 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Igkv4-73-201ENSMUST00000199760 358 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm18851-201ENSMUST00000210087 1058 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 AC153526.1-201ENSMUST00000219750 190 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm2080-201ENSMUST00000211299 1573 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.46□□□□□ -1.06
NpcdF8VQB8 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
NpcdF8VQB8 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
NpcdF8VQB8 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Grik1-210ENSMUST00000228034 2708 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm6545-201ENSMUST00000217186 1786 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm37077-201ENSMUST00000195723 3691 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm13731-201ENSMUST00000117332 196 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm12844-201ENSMUST00000119463 582 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm16456-201ENSMUST00000174431 920 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm18416-201ENSMUST00000175635 1003 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 n-R5s209-201ENSMUST00000179494 119 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm27025-201ENSMUST00000182392 942 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm28846-201ENSMUST00000189161 368 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm2229-201ENSMUST00000193328 710 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm29784-201ENSMUST00000196217 406 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm44243-201ENSMUST00000204323 692 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm44128-201ENSMUST00000204909 219 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm18537-201ENSMUST00000205709 989 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm45908-201ENSMUST00000212977 1177 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm34424-201ENSMUST00000213400 782 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 AC167192.4-201ENSMUST00000224087 993 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 AC130547.1-201ENSMUST00000228079 1047 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Olfr519-201ENSMUST00000084752 960 ntBASIC8.45□□□□□ -1.06
NpcdF8VQB8 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NpcdF8VQB8 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms