Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm7113-201ENSMUST00000120477 958 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm12535-201ENSMUST00000121025 484 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm11925-201ENSMUST00000121375 535 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Mir7033-201ENSMUST00000184259 81 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm17849-201ENSMUST00000219788 853 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm22256-201ENSMUST00000102291 107 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm12937-201ENSMUST00000118333 448 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm15621-201ENSMUST00000119162 364 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm12135-201ENSMUST00000119170 466 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm6142-201ENSMUST00000120290 325 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm22276-201ENSMUST00000122469 129 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm23954-201ENSMUST00000157213 353 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm26321-201ENSMUST00000157740 242 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm37511-201ENSMUST00000192901 294 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm8860-201ENSMUST00000193160 445 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm36965-201ENSMUST00000193797 394 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm36932-201ENSMUST00000195226 929 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm7463-201ENSMUST00000201541 547 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm44411-201ENSMUST00000204172 349 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm4585-201ENSMUST00000207218 452 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm33312-201ENSMUST00000222443 332 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lima1Q9ERG0 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Lima1Q9ERG0 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.27□□□□□ -1.4
Lima1Q9ERG0 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.27□□□□□ -1.4
Lima1Q9ERG0 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
Lima1Q9ERG0 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Lima1Q9ERG0 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.27□□□□□ -1.41
Lima1Q9ERG0 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms