Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 AC154361.1-201ENSMUST00000225694 745 ntBASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 AW822073-201ENSMUST00000075305 555 ntBASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Gm24207-201ENSMUST00000082781 108 ntBASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Ddx56Q9D0R4 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm14550-201ENSMUST00000117918 407 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm12849-201ENSMUST00000120013 739 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm13754-201ENSMUST00000120486 998 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm11385-201ENSMUST00000121513 570 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm12518-201ENSMUST00000122075 779 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm8577-201ENSMUST00000122420 986 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm15274-201ENSMUST00000131442 291 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm21979-201ENSMUST00000139887 291 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm15259-201ENSMUST00000151262 291 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm23077-201ENSMUST00000157854 116 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm24854-201ENSMUST00000158025 98 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm9499-201ENSMUST00000180888 964 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm21392-201ENSMUST00000182950 972 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Trbv28-201ENSMUST00000192804 264 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm2622-201ENSMUST00000200018 471 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm19092-201ENSMUST00000209036 969 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm45405-201ENSMUST00000211544 609 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm26437-201ENSMUST00000082595 105 ntBASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Ddx56Q9D0R4 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.15□□□□□ -1.27
Ddx56Q9D0R4 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ddx56Q9D0R4 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.27
Ddx56Q9D0R4 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ddx56Q9D0R4 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
Ddx56Q9D0R4 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Ddx56Q9D0R4 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm43386-201ENSMUST00000199654 4001 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Mir708-201ENSMUST00000102189 109 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm9432-201ENSMUST00000117810 759 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm15310-201ENSMUST00000117891 372 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm12242-201ENSMUST00000118824 738 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm11350-201ENSMUST00000121436 870 ntBASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC7.14□□□□□ -1.27
Ddx56Q9D0R4 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms