Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm29650-201ENSMUST00000188485 742 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm9517-201ENSMUST00000195021 874 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm42799-201ENSMUST00000201331 328 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm45042-201ENSMUST00000207377 211 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm4042-201ENSMUST00000216946 637 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.07□□□□□ -1.44
Use1Q9CQ56 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Use1Q9CQ56 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Mir711-201ENSMUST00000102188 82 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm13141-201ENSMUST00000117417 456 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm14659-201ENSMUST00000117667 843 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm13469-201ENSMUST00000118231 350 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm24442-201ENSMUST00000157238 327 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm22533-201ENSMUST00000158821 274 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm20432-201ENSMUST00000173716 250 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm26959-201ENSMUST00000182376 978 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm28846-201ENSMUST00000189161 368 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm43383-201ENSMUST00000195981 469 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm43664-201ENSMUST00000196038 734 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm2225-201ENSMUST00000209570 377 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm19056-201ENSMUST00000218220 797 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.06□□□□□ -1.44
Use1Q9CQ56 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Use1Q9CQ56 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Use1Q9CQ56 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Use1Q9CQ56 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.05□□□□□ -1.44
Use1Q9CQ56 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Use1Q9CQ56 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Use1Q9CQ56 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Use1Q9CQ56 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Use1Q9CQ56 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Use1Q9CQ56 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms