Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm12635-201ENSMUST00000117285 752 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm12040-201ENSMUST00000118357 537 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm12115-201ENSMUST00000119969 447 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm14070-201ENSMUST00000120773 428 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm23954-201ENSMUST00000157213 353 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm9064-201ENSMUST00000163579 566 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm7244-201ENSMUST00000164658 455 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Mir6769b-201ENSMUST00000184793 60 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm37511-201ENSMUST00000192901 294 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm37966-201ENSMUST00000193122 326 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm29778-201ENSMUST00000201667 466 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 AC133598.4-201ENSMUST00000224577 454 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 AC154361.1-201ENSMUST00000225694 745 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Mir455-201ENSMUST00000093594 82 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Krt88Q9CPR6 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm25757-201ENSMUST00000103986 123 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm26419-201ENSMUST00000104272 133 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Mir6367-201ENSMUST00000183385 102 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Mir7685-201ENSMUST00000183555 62 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm7412-201ENSMUST00000191692 605 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm37871-201ENSMUST00000194973 688 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm2398-201ENSMUST00000218347 883 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 AC122539.1-201ENSMUST00000219925 329 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 AC124489.1-201ENSMUST00000225852 526 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Mir138-2-201ENSMUST00000083578 71 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm25189-201ENSMUST00000083911 164 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.74□□□□□ -1.49
Krt88Q9CPR6 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Krt88Q9CPR6 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Krt88Q9CPR6 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.73□□□□□ -1.49
Krt88Q9CPR6 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Krt88Q9CPR6 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Krt88Q9CPR6 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms