Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Amd-ps5-201ENSMUST00000198406 989 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm9497-201ENSMUST00000199908 538 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm38840-201ENSMUST00000204716 843 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm9240-201ENSMUST00000206527 742 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 AC156560.1-201ENSMUST00000221425 256 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 AC154851.1-201ENSMUST00000221591 655 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm36758-201ENSMUST00000222594 310 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 AC131187.2-201ENSMUST00000223936 994 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 AL844586.1-201ENSMUST00000224297 1042 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 AC110380.1-201ENSMUST00000226987 389 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm6369-201ENSMUST00000069626 412 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm22504-201ENSMUST00000082963 139 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 AC122408.2-201ENSMUST00000217901 1391 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm4596-201ENSMUST00000117197 442 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm25505-201ENSMUST00000157220 246 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Mir8094-201ENSMUST00000183361 117 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm8676-201ENSMUST00000184206 637 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm28142-201ENSMUST00000186899 698 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm42932-201ENSMUST00000197280 744 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm43954-201ENSMUST00000204634 544 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 AV026068-219ENSMUST00000224148 933 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm17199-201ENSMUST00000097296 416 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm10997-201ENSMUST00000210294 1500 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim11Q99PQ2 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.11□□□□□ -1.11
Trim11Q99PQ2 AC158605.3-201ENSMUST00000218999 2538 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim11Q99PQ2 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms