Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Gm43417-201ENSMUST00000201586 5207 ntBASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Gm8534-201ENSMUST00000118553 766 ntBASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Gm17981-201ENSMUST00000191109 739 ntBASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Gm43160-201ENSMUST00000196453 421 ntBASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Gm5087-204ENSMUST00000225820 645 ntBASIC6.27□□□□□ -1.41
Cdh23Q99PF4 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Cdh23Q99PF4 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm25534-201ENSMUST00000175365 125 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm44111-201ENSMUST00000204649 399 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm45777-201ENSMUST00000213009 301 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm31931-201ENSMUST00000219666 222 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm23502-201ENSMUST00000083902 145 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm16128-201ENSMUST00000117855 626 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm23233-201ENSMUST00000157301 137 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm27875-201ENSMUST00000184425 123 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm44132-201ENSMUST00000205142 151 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm10064-201ENSMUST00000071235 399 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm22657-201ENSMUST00000104197 132 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm11805-201ENSMUST00000121238 600 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm24940-201ENSMUST00000158326 108 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm5372-201ENSMUST00000187540 409 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm18247-201ENSMUST00000222937 601 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Gm23737-201ENSMUST00000082547 159 ntBASIC6.26□□□□□ -1.41
Cdh23Q99PF4 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cdh23Q99PF4 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms