Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Mir711-201ENSMUST00000102188 82 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm24519-201ENSMUST00000104507 132 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm14513-201ENSMUST00000117403 123 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Zfp389-201ENSMUST00000118425 675 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm14998-201ENSMUST00000120502 495 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm14070-201ENSMUST00000120773 428 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm11263-201ENSMUST00000121853 749 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm26167-201ENSMUST00000158423 253 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm4202-201ENSMUST00000169025 733 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm26587-201ENSMUST00000180795 989 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm37103-201ENSMUST00000191830 115 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm43377-201ENSMUST00000201640 455 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm18838-201ENSMUST00000204855 886 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28bQ8CEG5 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm14382-201ENSMUST00000117374 437 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm12903-201ENSMUST00000121015 544 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm5135-201ENSMUST00000121100 573 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm23958-201ENSMUST00000157207 105 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm7244-201ENSMUST00000164658 455 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm28975-201ENSMUST00000186412 686 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm37375-201ENSMUST00000193859 387 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm37385-201ENSMUST00000195223 387 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm43798-201ENSMUST00000202056 394 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm18255-201ENSMUST00000211316 765 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28bQ8CEG5 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc28bQ8CEG5 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms