Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Gm25904-201ENSMUST00000158491 143 ntBASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Gm43772-201ENSMUST00000202052 379 ntBASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Gm44538-201ENSMUST00000205615 348 ntBASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Gm45448-201ENSMUST00000211739 209 ntBASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 AC174678.3-201ENSMUST00000227568 362 ntBASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 AC123533.2-201ENSMUST00000228176 375 ntBASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 AC139197.1-201ENSMUST00000228332 813 ntBASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Ccdc60Q8C4J0 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm24069-201ENSMUST00000104512 127 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm22710-201ENSMUST00000116892 125 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm14173-201ENSMUST00000117690 278 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm12653-201ENSMUST00000117778 561 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm11256-201ENSMUST00000118109 829 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm9506-201ENSMUST00000118516 320 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm7058-201ENSMUST00000119209 902 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm6977-201ENSMUST00000121568 512 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Mir1960-201ENSMUST00000157488 78 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm25374-201ENSMUST00000158158 101 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Cfhr3-201ENSMUST00000170441 1022 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm24155-201ENSMUST00000175259 110 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm43354-201ENSMUST00000196862 346 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm44374-201ENSMUST00000199821 140 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm44770-201ENSMUST00000205395 1264 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm44861-201ENSMUST00000208325 1220 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm26442-201ENSMUST00000082588 153 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm42989-201ENSMUST00000200646 2306 ntBASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ccdc60Q8C4J0 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.12
Ccdc60Q8C4J0 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Gm15967-201ENSMUST00000120027 1116 ntBASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Calr-ps-201ENSMUST00000121776 485 ntBASIC8.08□□□□□ -1.12
Ccdc60Q8C4J0 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms