Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Gm19324-201ENSMUST00000213229 1169 ntBASIC6.57□□□□□ -1.36
Trub1Q8C0D0 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.57□□□□□ -1.36
Trub1Q8C0D0 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Gm18618-201ENSMUST00000222211 473 ntBASIC6.57□□□□□ -1.36
Trub1Q8C0D0 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.57□□□□□ -1.36
Trub1Q8C0D0 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm15901-201ENSMUST00000117663 941 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm22604-201ENSMUST00000157604 311 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm24735-201ENSMUST00000158859 118 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm18600-201ENSMUST00000207205 505 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm7557-201ENSMUST00000221935 865 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trub1Q8C0D0 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm8692-201ENSMUST00000118102 438 ntBASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm14863-201ENSMUST00000119648 307 ntBASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm7212-201ENSMUST00000120817 348 ntBASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm9556-201ENSMUST00000182938 940 ntBASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm37883-201ENSMUST00000194970 725 ntBASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm9535-201ENSMUST00000218499 768 ntBASIC6.55□□□□□ -1.36
Trub1Q8C0D0 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trub1Q8C0D0 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms